Veranstaltung
| Titel | Biocomputing I (Bioinformatics III) – Programming in Python (SSP Evolution)(SSP Bioanalytics) |
| Title | Biocomputing I (Bioinformatics III) – Programming in Python (SSP Evolution)(SSP Bioanalytics) |
| Schwerpunkt/Focus | |
| Sprache/Language | englisch |
| VV-Nr./Course No. | 134403 |
| Modulverantwortlich/Responsible | Prof. Dr. Erich Bornberg-Bauer |
| Vertreter/Co-responsible | Dr. Mark Harrison |
| Anbieter/Teachers | Prof. Dr. Erich Bornberg-Bauer |
| Typ/Type | Praktikum + Seminar |
| SWS/Semerster periods per week | |
| Arbeitslast(h)/Work load | 150h |
| KP/Credit points | |
| Zuordnung/Classification | Fortgeschrittenen-Modul |
| Semester/Semester | WiSe |
| Studierende/Students | MSc Biowissenschaften MSc Biotechnologie MSc Molekulare Biomedizin MEd GymGes, MEd BK MEd HRSGe Bachelor HRSGe |
| Corona-Informationen/Corona-Information | |
| Zeit/Date | Block IV: 05.02.2024-01.03.2024 |
| Ort/Location | IEB, Institute for Evolution and Biodiversity, Hüfferstraße 1 |
| Beginn/Start | 05.02.2024 |
| Vorbesprechung/Obligatory pre-meeting | 21.11.2023; 18:00, Sozialraum Hüfferstraße 1 |
| Voraussetzung/Prerequisite | N/A |
| Anmeldung/Registration | online |
| Leistungskontrollen/Performance assessments | Protokoll + Präsentation + Mitarbeit |
| Termine f. Leistungskontrollen/Date for performance assessments | |
| max. NP/Max. grade points | 200 NP |
| Ziele/Aims | Basic python programming Handling and manipulating genomic and proteomic data |
| Inhalte/Content | Students will learn how to write simple but powerful scripts to automatize repetitive tasks and analyze diverse datasets from disparate resources. The module includes lectures covering the basics of Python programming and supervised practicals in which the students will apply the techniques covered in the lectures to biological datasets. |
| Methoden/Methods | Python scripting File management and command line usage in a Linux environment |
| Berufsrelevante und interdisziplinäre Komponenten/Occupational and interdisciplinary skills | |
| Voraussetzung für/Prerequisite for | |
| Präsenzpflicht/Compulsory presence | Yes |
| Plätze/Number of participants | 10 |
| Gruppengröße/Group size | |
| Materialien/Materials | Teaching materials can all be found on the module learnweb page: https://sso.uni-muenster.de/LearnWeb/learnweb2/user/index.php?id=33402 This will be accessible following the Vorbesprechung on 13.11.18 (Sozialraum, Hüfferstraße 1) |
| Literatur/Literature | Stephen H.D. Haddock and Casey W. Dunn: Practical Computing for Biologists; ISBN-10: 0878933913; http://www.amazon.de/Practical-Computing-Biologists-Steven-Haddock/dp/0878933913 |
| Links | https://bornberglab.org/msc-teaching/ |
| Sonstiges/Further information |
Modulelemente:
Elemente of the module:
| Titel/Title | Zeit (von...bis)/Time (from...to) | Ort(Raum)/Location | |
|---|---|---|---|
| Übungen/Practical exercises | |||
| Vorlesung/Lecture | |||
| Seminare/Semeinars | |||
| Exkursionen/Excursions |
= Modul gehört zum SPP Imoplant / Module is part of the SSP Imoplant
= Modul gehört zum SPP Evolution /Module is part of the SSP Evolution
= Modul gehört zum SPP Bioanalytics and Biochemistry /Module is part of the SSP Bioanalytics and Biochemistry
= Modul gehört zum SPP Neuroscience and Behaviour /Module is part of the SSP Neuroscience and Behaviour
= Modul gehört zum SPP Quantitative Cell Biology /Module is part of the SSP Quantitative Cell Biology